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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41709652_41710383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41709652 - 41710383

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTGATATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CCCTCCTGTATT

Flanking Amino Acid:

TLNQLNVSKTDEAFFDSENS

Intron Amino Acid Position:

1989

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

69.3

0.44

63.7

41.8

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

49.5

0.04

1.8

64.04

46.5

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259