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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41711053_41711802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41711053 - 41711802

Intron Length:

750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGGAGT

5'SS Class:

major

3'SS Sequence:

TCTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

CTTACACAGACT

Flanking Amino Acid:

LLKMRHTSSKVRFAALLALL

Intron Amino Acid Position:

2094

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.2

65.5

45.7

Major BPS

68.9

0.47

59.6

38.6

Major PPT

85.1

0.79

0.8

84.6

30.4

Minor 5ss

28.9

-2.4

3.3

40.4

45.4

Minor BPS

43.1

-0.4

2.2

66.04

44.3

Associated Gene:

Gene:

HEATR1

Ensembl Gene ID:

ENSAPLG00000008015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008453

41675148 - 41712406

37259