Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_41716620_41716694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41716620 - 41716694

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTACGTATG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

AACTAGTTAATT

Flanking Amino Acid:

LGITKISTENGEMPDGSQFG

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.9

41.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

90.8

0.92

0.6

85.1

29.7

Minor 5ss

40.7

-1

3.1

55.3

42.3

Minor BPS

49.3

0.03

2.2

68.38

42.6

Associated Gene:

Gene:

LGALS8

Ensembl Gene ID:

ENSAPLG00000007822

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008160

41714393 - 41724015

9623