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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41736593_41741377_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41736593 - 41741377

Intron Length:

4785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGTTTCTG

5'SS Class:

weak_major

3'SS Sequence:

ATTTGGTTGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TACTATTTAAGT

Flanking Amino Acid:

DPSTLSITMVYEFFIIFVLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.1

56.3

42.2

Major BPS

79.5

0.73

0.9

36.9

Major PPT

58.9

0.2

1.2

60.4

44.6

Minor 5ss

-1

53.9

43.5

Minor BPS

57.5

0.32

1.8

73.69

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033818

41730528 - 41745181

14654