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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41761284_41765489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41761284 - 41765489

Intron Length:

4206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAA

U12 Branch Point Sequence:

GAAGATTCAACT

Flanking Amino Acid:

LLFAVDVRLAVKAKKASRLK

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

65.2

0.38

1.2

69.6

37.5

Major PPT

83.1

0.74

0.9

80.2

37.3

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

46.7

-0.1

1.8

60.35

42.6

Associated Gene:

Gene:

AGT

Ensembl Gene ID:

ENSAPLG00000015860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016548

41759451 - 41766714

7264