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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41786169_41786602_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41786169 - 41786602

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCAATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

CCCGTCTCAATT

Flanking Amino Acid:

TRTDICQGDLGDCWLLAAIA

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

0.45

1.2

71.6

36.4

Major PPT

75.2

0.57

0.9

68.5

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

48.3

-0

1.7

58.48

45.6

Associated Gene:

Gene:

CAPN9

Ensembl Gene ID:

ENSAPLG00000014110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014718

41780753 - 41808561

27809