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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41788207_41789111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41788207 - 41789111

Intron Length:

905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCATATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TTTTCCATATTA

Flanking Amino Acid:

RCSMVGCSIDTSSAAESEAK

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

82.3

0.8

83.6

25.8

Major PPT

79.4

0.66

0.9

72.8

35.9

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

64.2

0.44

1.9

80.37

35.6

Associated Gene:

Gene:

CAPN9

Ensembl Gene ID:

ENSAPLG00000014110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014718

41780753 - 41808561

27809