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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41796542_41797232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41796542 - 41797232

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTCTAT

5'SS Class:

major

3'SS Sequence:

CGATCCCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCGAT

U12 Branch Point Sequence:

CTGCCTTCGATC

Flanking Amino Acid:

MLSIGYSIYESPSGDGHLNK

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

67.9

39.8

Major BPS

61.4

0.28

1.3

61.8

44.5

Major PPT

65.3

0.34

0.9

55.4

36.2

Minor 5ss

44.5

-0.6

3.2

64.7

46.6

Minor BPS

47.9

-0.1

1.5

54.59

38.3

Associated Gene:

Gene:

CAPN9

Ensembl Gene ID:

ENSAPLG00000014110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014718

41780753 - 41808561

27809