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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41797442_41798232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41797442 - 41798232

Intron Length:

791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

TTGTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AGATATTGAATG

Flanking Amino Acid:

RIFSEKKAITEDLDENVAID

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

62.5

43.8

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

83.7

0.76

0.8

77.2

37.1

Minor 5ss

34.8

-1.7

2.9

37.8

40.8

Minor BPS

47.4

-0.3

1.6

49.57

37.9

Associated Gene:

Gene:

CAPN9

Ensembl Gene ID:

ENSAPLG00000014110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014718

41780753 - 41808561

27809