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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41804794_41805718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41804794 - 41805718

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

ATTTTCCTATGT

Flanking Amino Acid:

YELRSALKAAGYQLNNYLLQ

Intron Amino Acid Position:

754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

64.5

0.33

1.2

67.5

42.8

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

48.5

-0

2.2

74.51

42.4

Associated Gene:

Gene:

CAPN9

Ensembl Gene ID:

ENSAPLG00000014110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014718

41780753 - 41808561

27809