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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41826507_41835613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41826507 - 41835613

Intron Length:

9107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

TAACCTTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TTTCCTTTAACC

Flanking Amino Acid:

HSAPFSWETKSQMEFSVASL

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

77.3

0.68

79.3

29.4

Major PPT

62.6

0.28

1.1

58.2

41.5

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

1.05

87.93

27.6

Associated Gene:

Gene:

C1orf198

Ensembl Gene ID:

ENSAPLG00000013985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014564

41825853 - 41844013

18161