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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41835665_41843665_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41835665 - 41843665

Intron Length:

8001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCCGAG

5'SS Class:

major

3'SS Sequence:

AATTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CATTCTTGAATT

Flanking Amino Acid:

GQKLVRFGDEDITWQDEHSA

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.34

1.3

54.1

45.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

81.9

0.72

0.9

78.8

38.6

Minor 5ss

39.8

-1.1

3.5

54.5

49.7

Minor BPS

66.8

0.61

1.4

77.76

Associated Gene:

Gene:

C1orf198

Ensembl Gene ID:

ENSAPLG00000013985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014564

41825853 - 41844013

18161