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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41849681_41851614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41849681 - 41851614

Intron Length:

1934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

ATTAATATATTT

Flanking Amino Acid:

KIARSWMNLKSISPSYKSLP

Intron Amino Acid Position:

798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

0.6

1.2

75.9

36.3

Major PPT

93.2

0.97

0.6

92.1

18.5

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

44.4

-0.3

1.9

65.07

39.5

Associated Gene:

Gene:

TTC13

Ensembl Gene ID:

ENSAPLG00000013644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014281

41849557 - 41884874

35318