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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41855831_41857107_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41855831 - 41857107

Intron Length:

1277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

ATCTGTTTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TCTTGTTTAATC

Flanking Amino Acid:

DGFTITITGDKVGNILFSVE

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

83.3

29.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

68.4

0.41

64.9

40.8

Minor 5ss

63.8

0.47

2.2

75.6

33.8

Minor BPS

65.4

0.46

1.7

73.34

38.7

Associated Gene:

Gene:

TTC13

Ensembl Gene ID:

ENSAPLG00000013644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014281

41849557 - 41884874

35318