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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41865459_41865828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41865459 - 41865828

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CCAATGTTAACG

Flanking Amino Acid:

DMFDIAVKWRRIADPDQPVL

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

80.6

33.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

85.5

0.8

0.7

81.4

30.6

Minor 5ss

35.9

-1.6

3.2

48.7

47.1

Minor BPS

-0.4

2.1

47.89

45.5

Associated Gene:

Gene:

TTC13

Ensembl Gene ID:

ENSAPLG00000013644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014281

41849557 - 41884874

35318