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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41876520_41878632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41876520 - 41878632

Intron Length:

2113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATC

Flanking Amino Acid:

AIRQFSTMLQEEPELVSAIY

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.5

0.57

70.3

39.7

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

74.9

0.76

1.1

77.11

33.4

Associated Gene:

Gene:

TTC13

Ensembl Gene ID:

ENSAPLG00000013644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014281

41849557 - 41884874

35318