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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41878704_41881462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41878704 - 41881462

Intron Length:

2759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTCATTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTACTTACGC

Flanking Amino Acid:

TDNDSTNEELAIAYVLIGNG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.4

42.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

69.5

0.44

0.9

68.6

37.5

Minor 5ss

-1.4

3.3

47.2

48.2

Minor BPS

56.9

0.19

2.1

75.23

41.5

Associated Gene:

Gene:

TTC13

Ensembl Gene ID:

ENSAPLG00000013644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014281

41849557 - 41884874

35318