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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41881539_41882808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41881539 - 41882808

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TGATGTTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GTTTGCTAAACA

Flanking Amino Acid:

VLSLNTEKILSQAKSLAEQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.5

41.1

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

0.65

72.4

42.4

Minor 5ss

45.7

-0.5

2.9

61.8

44.9

Minor BPS

60.4

0.32

2.1

75.93

41.5

Associated Gene:

Gene:

TTC13

Ensembl Gene ID:

ENSAPLG00000013644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014281

41849557 - 41884874

35318