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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41897080_41897569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41897080 - 41897569

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

AAATCAGTACAT

Flanking Amino Acid:

VLTSNSQAIRVTLNLNRMLS

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

88.1

28.7

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

45.1

-0.5

3.1

44.3

Minor BPS

40.6

-0.6

2.3

59.26

43.1

Associated Gene:

Gene:

ARV1

Ensembl Gene ID:

ENSAPLG00000013578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014145

41885066 - 41897676

12611