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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41985365_41985427_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41985365 - 41985427

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCGGCTGGA

5'SS Class:

weak_major

3'SS Sequence:

GGGGCGGCGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCTAC

U12 Branch Point Sequence:

CTCTCTACGACC

Flanking Amino Acid:

AAAMGAREPCRLPKIKGGGA

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.4

41.2

Major BPS

51.3

0.03

1.3

52.4

42.7

Major PPT

38.7

-0.6

1.6

27.3

37.6

Minor 5ss

20.9

-3.4

30.1

43.6

Minor BPS

46.9

-0.2

1.8

58.51

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042414

41982179 - 41985957

3779