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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41988293_41989654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41988293 - 41989654

Intron Length:

1362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

CCACATCTGACT

Flanking Amino Acid:

SEQVQYVIKQLAKEMGESPD

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

87.7

0.85

0.7

85.4

29.3

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

43.3

-0.4

1.8

54.83

40.9

Associated Gene:

Gene:

GNPAT

Ensembl Gene ID:

ENSAPLG00000013047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047339

41985336 - 42005035

19700

ENSAPLT00000013646

41985336 - 42005419

20084