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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41991444_41993864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41991444 - 41993864

Intron Length:

2421

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GATTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGGAT

U12 Branch Point Sequence:

TTTTGTTGGATT

Flanking Amino Acid:

LALPVIAAGIDFLGMKIVGE

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.1

1.16

0.7

90.9

28.7

Major BPS

53.7

0.09

1.6

57.1

49.4

Major PPT

80.8

0.69

0.9

77.2

41.6

Minor 5ss

-2.4

3.8

41.5

45.1

Minor BPS

54.3

0.22

1.9

79.16

37.6

Associated Gene:

Gene:

GNPAT

Ensembl Gene ID:

ENSAPLG00000013047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013646

41985336 - 42005419

20084

ENSAPLT00000047339

41985336 - 42005035

19700