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Intron Name: Anas_platyrhynchos_platyrhynchos_3_41995476_41996163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41995476 - 41996163

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGAT

5'SS Class:

major

3'SS Sequence:

TGGTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TAACCTTGAACT

Flanking Amino Acid:

INLCPYNLVPRHLPQKPSED

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

66.2

39.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

83.6

0.76

0.9

36.6

Minor 5ss

36.6

-1.5

3.7

55.8

48.4

Minor BPS

64.4

0.53

1.4

77.02

38.6

Associated Gene:

Gene:

GNPAT

Ensembl Gene ID:

ENSAPLG00000013047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047339

41985336 - 42005035

19700

ENSAPLT00000013646

41985336 - 42005419

20084