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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42000026_42002387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42000026 - 42002387

Intron Length:

2362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TAGATATTAACA

Flanking Amino Acid:

FIFFPGISLKDFEEGCFLLT

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

0.79

0.8

83.7

25.7

Major PPT

83.8

0.76

0.7

76.7

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

57.7

0.24

1.6

66.38

39.5

Associated Gene:

Gene:

GNPAT

Ensembl Gene ID:

ENSAPLG00000013047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013646

41985336 - 42005419

20084

ENSAPLT00000047339

41985336 - 42005035

19700