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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42002529_42003401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42002529 - 42003401

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGT

5'SS Class:

major

3'SS Sequence:

CTTGTAATGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCTTGTAAT

Flanking Amino Acid:

MFRPFVEGYQLIFRYLSKET

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

69.7

43.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

64.4

0.33

63.5

41.9

Minor 5ss

44.2

-0.6

3.2

64.5

46.9

Minor BPS

0.3

1.9

82.05

39.3

Associated Gene:

Gene:

GNPAT

Ensembl Gene ID:

ENSAPLG00000013047

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047339

41985336 - 42005035

19700

ENSAPLT00000013646

41985336 - 42005419

20084