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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42006361_42006445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42006361 - 42006445

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCG

5'SS Class:

major

3'SS Sequence:

CCTCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CCCCGCTGAGCG

Flanking Amino Acid:

RLPGPGGPLCVFRSQLPRRN

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

53.6

45.1

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

0.56

0.7

24.7

Minor 5ss

33.2

-1.9

40.9

44.9

Minor BPS

39.2

-0.9

37.08

Associated Gene:

Gene:

PDCD2

Ensembl Gene ID:

ENSAPLG00000021270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032230

42006063 - 42009434

3372