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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42022191_42023554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42022191 - 42023554

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

CTTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CTTTGTTTTACA

Flanking Amino Acid:

HSRDSPKCYKLTERTVIGCS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

64.9

40.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

88.8

0.87

0.7

83.2

31.9

Minor 5ss

37.4

-1.4

52.6

43.7

Minor BPS

54.3

0.13

2.1

70.62

41.9

Associated Gene:

Gene:

PSMB1

Ensembl Gene ID:

ENSAPLG00000012435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012962

42021149 - 42026110

4962