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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42117096_42122734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42117096 - 42122734

Intron Length:

5639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAATAA

5'SS Class:

major

3'SS Sequence:

ATTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GATAAAATAATG

Flanking Amino Acid:

VIQPVQPPLPGGTPNLKTLW

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

67.2

34.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

85.6

0.8

0.7

81.6

29.6

Minor 5ss

35.2

-1.7

3.4

46.4

48.9

Minor BPS

41.5

-0.7

1.9

46.09

39.5

Associated Gene:

Gene:

FAM120B

Ensembl Gene ID:

ENSAPLG00000012280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012798

42083150 - 42132734

49585