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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42471253_42471896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42471253 - 42471896

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

GTACGTTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ACTCATTTAACT

Flanking Amino Acid:

ELCVWSTAGQTLHLLGHKHS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

66.9

0.38

1.1

65.3

45.3

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

64.5

0.53

1.5

76.83

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029