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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42472039_42474153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42472039 - 42474153

Intron Length:

2115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

AAAATTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGAGTCTTAATA

Flanking Amino Acid:

LAECAQKEQEGITPQGIIIG

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

38.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

70.3

0.46

42.9

Minor 5ss

36.4

-1.5

3.7

54.5

49.7

Minor BPS

65.3

0.48

1.4

68.34

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029