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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42474279_42474735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42474279 - 42474735

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATAC

5'SS Class:

strong_major

3'SS Sequence:

AAACTTATCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTGGCTAAACT

Flanking Amino Acid:

ENRIYVLSAKNEAILAELNG

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.3

26.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

65.9

0.36

58.5

40.8

Minor 5ss

32.8

-2

40.8

45.7

Minor BPS

58.3

0.34

2.2

83.33

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029