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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42474850_42476846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42474850 - 42476846

Intron Length:

1997

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

CTATCTTTATTT

Flanking Amino Acid:

ISVSEDRSFKVWDYSTGLLI

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.4

1.05

0.8

78.4

36.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

72.1

0.5

71.8

26.8

Minor 5ss

21.3

-3.3

3.8

29.9

43.2

Minor BPS

63.5

0.5

1.6

76.15

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029