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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42476899_42478156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42476899 - 42478156

Intron Length:

1258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGGCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TACTCTGGAAAT

Flanking Amino Acid:

LLIYQSGILTAYPLQSLLID

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.7

0.58

72.2

37.8

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

46.6

-0.1

2.2

67.08

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029