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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42478228_42479132_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42478228 - 42479132

Intron Length:

905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

ATTACTTTTACT

Flanking Amino Acid:

QVITGCGDGQLRIFSLITDH

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

68.1

0.45

58.1

38.5

Major PPT

92.6

0.96

0.6

88.3

21.3

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

66.7

0.61

1.6

83.2

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029