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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42482906_42483327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42482906 - 42483327

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGGTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

AATTCTATACCA

Flanking Amino Acid:

FELEAFLCYKDYSGLSIQFA

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.1

31.9

Major BPS

74.5

0.61

79.6

29.1

Major PPT

68.6

0.42

1.2

70.2

39.4

Minor 5ss

44.3

-0.6

2.8

57.2

47.1

Minor BPS

0.09

1.9

67.9

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020679

42471073 - 42544101

73029

ENSAPLT00000042495

42471073 - 42595293

124221