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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42483396_42484360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42483396 - 42484360

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATAATTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TGCAGTATAATT

Flanking Amino Acid:

ALTKKTVNGKVLCVITSMFE

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.15

0.6

96.2

11.9

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

69.8

0.45

62.7

43.3

Minor 5ss

39.3

-1.2

2.8

50.9

45.5

Minor BPS

45.3

-0.2

61.88

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029