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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42485343_42487036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42485343 - 42487036

Intron Length:

1694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TACTTTACTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AACACTTTAATA

Flanking Amino Acid:

SKKEPSRKTLGVKSTVKDQP

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

75.6

0.58

0.8

70.3

34.8

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

62.9

0.4

1.3

63.44

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029