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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42487116_42489050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42487116 - 42489050

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TGTTTCATATAG

Flanking Amino Acid:

IQSSGYTAAPRMTMFSPNTN

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.4

37.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

88.1

0.86

0.6

84.9

22.8

Minor 5ss

30.1

-2.3

2.6

34.1

41.4

Minor BPS

-0.3

58.22

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029