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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42489123_42490319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42489123 - 42490319

Intron Length:

1197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTAAC

5'SS Class:

major

3'SS Sequence:

CCCTTTTTTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

CCTTTTTTGAAG

Flanking Amino Acid:

YISKRKTSVECTRKEYPLES

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

74.1

36.5

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

75.9

0.58

77.6

28.5

Minor 5ss

34.8

-1.7

41.6

39.5

Minor BPS

51.4

-0.1

1.5

54.07

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029