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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42498279_42498854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42498279 - 42498854

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAACTAGA

5'SS Class:

major

3'SS Sequence:

ATTTTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

ATTTTTTTAACA

Flanking Amino Acid:

VCKNEPALILGKGMFHKAIR

Intron Amino Acid Position:

595

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

70.7

41.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

84.7

0.78

0.9

81.5

34.3

Minor 5ss

40.8

-1

2.6

48.6

42.2

Minor BPS

81.8

0.9

85.09

27.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029