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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42498989_42505180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42498989 - 42505180

Intron Length:

6192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTTAA

5'SS Class:

major

3'SS Sequence:

ATATTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTAACG

Flanking Amino Acid:

HVDTTKDDLKQYKQRIFCKL

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

70.4

31.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

87.1

0.83

0.8

85.3

34.4

Minor 5ss

36.3

-1.6

2.9

45.6

43.6

Minor BPS

75.3

0.66

1.6

79.5

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029