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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42505279_42505610_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

42505279 - 42505610

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GAGAACTTTGCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTGCTTTAACA

Flanking Amino Acid:

SLSAVNDFYSYIVLTAGSNR

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

63.8

0.31

1.1

54.6

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

81.5

0.98

1.2

86.93

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029