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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42505733_42516273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42505733 - 42516273

Intron Length:

10541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTATATA

5'SS Class:

major

3'SS Sequence:

TTTAATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATAATTTTAATA

Flanking Amino Acid:

RSVHQICQNKGSAFSTQQPE

Intron Amino Acid Position:

713

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

74.2

35.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.7

0.71

0.9

78.4

39.4

Minor 5ss

41.1

-1

2.6

51.7

44.8

Minor BPS

63.2

0.41

1.2

66.74

33.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029