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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42516372_42527207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42516372 - 42527207

Intron Length:

10836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

AACTCTTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ACTTCCTGAAAC

Flanking Amino Acid:

GIKLWDLRTLRCERRFEGHS

Intron Amino Acid Position:

745

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

64.7

0.33

1.1

63.8

36.3

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

64.9

0.45

1.6

71.35

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042495

42471073 - 42595293

124221

ENSAPLT00000020679

42471073 - 42544101

73029