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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42647067_42650360_F

Intron Information:

Intron Rank:

146368

Intron Class:

major

Intron Phase:

Intron Coordinates:

42647067 - 42650360

Intron Length:

3294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

ACACCTTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

CTTACATTACAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

75.4

0.57

0.9

68.3

36.6

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

47.4

-0.2

61.64

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047916

42646676 - 42651769

5094