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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42700535_42701448_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42700535 - 42701448

Intron Length:

914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CACACTTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTTGTAGTAACA

Flanking Amino Acid:

ITLWVSSDAQDGDKEEENTF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

33.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

76.2

0.59

0.9

72.5

37.2

Minor 5ss

42.4

-0.8

2.8

51.5

44.9

Minor BPS

49.1

-0

2.3

71.68

40.7

Associated Gene:

Gene:

THBS2

Ensembl Gene ID:

ENSAPLG00000009492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009989

42699368 - 42729773

30406