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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42714777_42717643_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42714777 - 42717643

Intron Length:

2867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

AATGCCTCAATT

Flanking Amino Acid:

AANATYHCVKDNCPLLPNSG

Intron Amino Acid Position:

728

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

83.2

30.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

76.4

0.59

0.9

70.4

40.1

Minor 5ss

33.6

-1.9

41.3

45.3

Minor BPS

62.4

0.47

1.6

76.03

40.7

Associated Gene:

Gene:

THBS2

Ensembl Gene ID:

ENSAPLG00000009492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009989

42699368 - 42729773

30406