Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_42717752_42719497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42717752 - 42719497

Intron Length:

1746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACGC

5'SS Class:

major

3'SS Sequence:

TTCTTCTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATATTCTTAAAT

Flanking Amino Acid:

DDNDGVEDDKDNCPLLFNPR

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

63.6

41.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

76.1

0.59

0.8

71.1

34.5

Minor 5ss

-1.8

3.1

43.2

37.9

Minor BPS

74.5

0.85

1.3

84.56

35.2

Associated Gene:

Gene:

THBS2

Ensembl Gene ID:

ENSAPLG00000009492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009989

42699368 - 42729773

30406