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Intron Name: Anas_platyrhynchos_platyrhynchos_3_42728800_42729461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42728800 - 42729461

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CCATTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTTTCCCCATTT

Flanking Amino Acid:

YFSDLKYECRDA*

Intron Amino Acid Position:

1181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

1.1

79.6

29.7

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

82.9

0.74

0.8

80.5

31.3

Minor 5ss

36.9

-1.5

2.7

44.2

43.6

Minor BPS

52.4

0.16

2.1

81.17

40.6

Associated Gene:

Gene:

THBS2

Ensembl Gene ID:

ENSAPLG00000009492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009989

42699368 - 42729773

30406