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Intron Name: Anas_platyrhynchos_platyrhynchos_3_43043972_43072621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43043972 - 43072621

Intron Length:

28650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGTAT

U12 Branch Point Sequence:

TTTCCTTCCAAA

Flanking Amino Acid:

SRQNKTNKSSASSCDQELQS

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

59.8

0.24

1.5

60.1

46.3

Major PPT

65.9

0.36

68.3

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

47.4

-0.2

66.41

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039137

43020763 - 43125341

104579

ENSAPLT00000022373

43035738 - 43144776

109039

ENSAPLT00000010772

43023319 - 43144776

121458